Index

A

atomic_density (glassure.configuration.SampleConfig property)

attenuation_factor (glassure.configuration.IntNormalization attribute)

B

bkg (glassure.configuration.DataConfig attribute) bkg_scaling (glassure.configuration.DataConfig attribute)

BkgNotInRangeError BROWN_HUBBELL (glassure.methods.ScatteringFactorSource attribute)

C

calculate_angles() (in module glassure.soller_correction) calculate_coherent_scattering_factor() (in module glassure.scattering_factors) calculate_dispersion_angle_map() (glassure.soller_correction.SollerCorrection method) calculate_f_mean_squared() (in module glassure.utility) calculate_f_squared_mean() (in module glassure.utility) calculate_fr() (in module glassure.transform) calculate_gr() (in module glassure.transform) calculate_incoherent_scattered_intensity() (in module glassure.scattering_factors) calculate_incoherent_scattering() (in module glassure.utility) calculate_pdf() (in module glassure.calc) calculate_rectangular_side_points() (in module glassure.soller_correction) calculate_s0() (in module glassure.utility) calculate_sq() (in module glassure.transform)

calculate_sq_from_fr() (in module glassure.transform) calculate_sq_from_gr() (in module glassure.transform) calculate_transfer_function() (in module glassure.transfer_function) calculate_weighting_factor() (in module glassure.utility) calculate_x_axis_intercept() (in module glassure.soller_correction) calculate_y_axis_intercept() (in module glassure.soller_correction) calculation_config (glassure.configuration.Result attribute) composition (glassure.configuration.SampleConfig attribute) container_scattering (glassure.configuration.FitNormalization attribute) convert_density_to_atoms_per_cubic_angstrom() (in module glassure.utility) convert_two_theta_to_q_space() (in module glassure.utility) convert_two_theta_to_q_space_raw() (in module glassure.utility) create_calculate_pdf_configs() (in module glassure.calc)

D

data (glassure.configuration.DataConfig attribute) (glassure.pattern.Pattern property)

density (glassure.configuration.SampleConfig attribute)

E

ElementNotImplementedException elements (glassure.scattering_factors.ScatteringFactorCalculatorBrownHubbell property) (glassure.scattering_factors.ScatteringFactorCalculatorHajdu property) (glassure.scattering_factors.ScatteringFactorCalculatorXraylib property) extend_to() (glassure.pattern.Pattern method)

extrapolate_to_zero_linear() (in module glassure.utility) extrapolate_to_zero_poly() (in module glassure.utility) extrapolate_to_zero_spline() (in module glassure.utility) extrapolate_to_zero_step() (in module glassure.utility) extrapolation (glassure.configuration.TransformConfig attribute) ExtrapolationMethod (class in glassure.methods)

F

FFT (glassure.methods.FourierTransformMethod attribute) FIT (glassure.methods.NormalizationMethod attribute) fourier_transform_method (glassure.configuration.TransformConfig attribute)

FourierTransformMethod (class in glassure.methods) fr (glassure.configuration.Result attribute) from_dict() (glassure.pattern.Pattern static method) from_file() (glassure.pattern.Pattern static method)

G

get_available_elements() (in module glassure.scattering_factors) get_calculator() (in module glassure.scattering_factors) get_coherent_scattering_factor() (glassure.scattering_factors.ScatteringFactorCalculatorBrownHubbell method) (glassure.scattering_factors.ScatteringFactorCalculatorHajdu method) (glassure.scattering_factors.ScatteringFactorCalculatorXraylib method) get_incoherent_intensity() (glassure.scattering_factors.ScatteringFactorCalculatorBrownHubbell method) (glassure.scattering_factors.ScatteringFactorCalculatorHajdu method) (glassure.scattering_factors.ScatteringFactorCalculatorXraylib method) glassure module glassure.calc module glassure.configuration module glassure.fitting module

glassure.methods module glassure.optimization module glassure.pattern module glassure.scattering_factors module glassure.soller_correction module glassure.transfer_function module glassure.transform module glassure.utility module gr (glassure.configuration.Result attribute)

H

HAJDU (glassure.methods.ScatteringFactorSource attribute)

I

i_q_peak() (in module glassure.fitting) incoherent_scattering (glassure.configuration.FitNormalization attribute) (glassure.configuration.IntNormalization attribute)

INTEGRAL (glassure.methods.FourierTransformMethod attribute) (glassure.methods.NormalizationMethod attribute) iterations (glassure.configuration.OptimizeConfig attribute)

K

kn_correction (glassure.configuration.TransformConfig attribute)

L

limit() (glassure.pattern.Pattern method) LINEAR (glassure.methods.ExtrapolationMethod attribute) (glassure.methods.NormalizationFitScaling attribute)

load() (glassure.pattern.Pattern method)

M

Map (class in glassure.soller_correction) method (glassure.configuration.ExtrapolationConfig attribute) (glassure.configuration.FitNormalization attribute) module glassure glassure.calc glassure.configuration glassure.fitting glassure.methods glassure.optimization glassure.pattern glassure.scattering_factors glassure.soller_correction glassure.transfer_function glassure.transform glassure.utility

multiple_scattering (glassure.configuration.FitNormalization attribute)

N

name (glassure.pattern.Pattern attribute) normalization (glassure.configuration.TransformConfig attribute)

NormalizationFitScaling (class in glassure.methods) NormalizationMethod (class in glassure.methods) normalize_composition() (in module glassure.utility)

O

optimize (glassure.configuration.CalculationConfig attribute) optimize_density() (in module glassure.optimization)

optimize_sq() (in module glassure.optimization) overlap (glassure.configuration.ExtrapolationConfig attribute)

P

Pattern (class in glassure.pattern)

POLY (glassure.methods.ExtrapolationMethod attribute)

Q

q_cutoff (glassure.configuration.FitNormalization attribute) q_max (glassure.configuration.TransformConfig attribute)

q_min (glassure.configuration.TransformConfig attribute) QUADRATIC (glassure.methods.NormalizationFitScaling attribute)

R

r_cutoff (glassure.configuration.OptimizeConfig attribute) r_max (glassure.configuration.TransformConfig attribute) r_min (glassure.configuration.TransformConfig attribute)

r_step (glassure.configuration.TransformConfig attribute) rebin() (glassure.pattern.Pattern method) replace (glassure.configuration.ExtrapolationConfig attribute)

S

s0 (glassure.configuration.ExtrapolationConfig attribute) sample (glassure.configuration.CalculationConfig attribute) save() (glassure.pattern.Pattern method) scattering_factor_source (glassure.configuration.TransformConfig attribute) ScatteringFactorCalculatorBrownHubbell (class in glassure.scattering_factors) ScatteringFactorCalculatorHajdu (class in glassure.scattering_factors) ScatteringFactorCalculatorXraylib (class in glassure.scattering_factors) ScatteringFactorSource (class in glassure.methods)

serialize() (in module glassure.pattern) smooth() (glassure.pattern.Pattern method) SollerCorrection (class in glassure.soller_correction) SollerCorrectionGui (class in glassure.soller_correction) SourceNotImplementedException SPLINE (glassure.methods.ExtrapolationMethod attribute) sq (glassure.configuration.Result attribute) STEP (glassure.methods.ExtrapolationMethod attribute)

T

t_r_peak() (in module glassure.fitting) to_dict() (glassure.pattern.Pattern method) transfer_function_dac() (glassure.soller_correction.SollerCorrection method) transfer_function_from_region() (glassure.soller_correction.SollerCorrection method)

transfer_function_sample() (glassure.soller_correction.SollerCorrection method) transform (glassure.configuration.CalculationConfig attribute) TYPE (glassure.configuration.FitNormalization attribute) (glassure.configuration.IntNormalization attribute)

U

use_modification_fcn (glassure.configuration.OptimizeConfig attribute) (glassure.configuration.TransformConfig attribute)

V

validate() (in module glassure.pattern)

validate_input() (in module glassure.calc) vector_length() (in module glassure.soller_correction)

W

wavelength (glassure.configuration.TransformConfig attribute)

X

x (glassure.pattern.Pattern attribute)

Y

y (glassure.pattern.Pattern attribute)